Summary of Gene (AT2G47030.1)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon TSS from cDNA TSS information AT2G47030.1 5'->3' (-) Promoter sequence AT2G47010.1
AT2G47010.2 TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS peak | A | 85 | - | 19326397 | -129 |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | T | clone | - | 19326398 | -130 |
TSS clone | A | clone | - | 19326397 | -129 |
TSS clone | C | clone | - | 19326396 | -128 |
TSS clone | T | clone | - | 19326395 | -127 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | CTTCTATATAAACC | - | 19326420 | 19326433 | -152 | -165 |
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | ACGTCACG | - | 19326552 | 19326559 | -284 | -291 | |||
AtREG489 | ACGTCACG | ABA, DREB1Aox | PPDB Motif | ACGT  | PLACE Motif | ACGT  | |||
REG | AAATACCCTTA | - | 19326609 | 19326619 | -341 | -351 | |||
AtREG602 | AAATACCC | PPDB Motif |   | PLACE Motif |   | ||||
AtREG567 | AATACCCT | PPDB Motif | ACCCT  | PLACE Motif |   | ||||
AtREG623 | ATACCCTT | PPDB Motif | ACCCT  | PLACE Motif |   | ||||
AtREG570 | TACCCTTA | PPDB Motif | ACCCT  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |