Summary of Gene (014-051-A08)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon AK066255 AK103959 AK105939 AY870611 J100029J01 J100064E11 J100068H13 TSS from cDNA TSS information 014-051-A08 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | G | clone | + | 14969392 | -114 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | CGCGTGGGCCGC | + | 14969099 | 14969110 | -407 | -396 | |||
OsREG530 | CGCGTGGG | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG602 | GCGTGGGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG571 | CGTGGGCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG564 | GTGGGCCG | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG618 | TGGGCCGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | CCGAGCCG | + | 14969150 | 14969157 | -356 | -349 | |||
OsREG540 | CCGAGCCG | PPDB Motif |   | PLACE Motif |   | ||||
REG | GCCCACGC | + | 14969175 | 14969182 | -331 | -324 | |||
OsREG602 | GCCCACGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | GGTCCCACCTG | + | 14969241 | 14969251 | -265 | -255 | |||
OsREG650 | GGTCCCAC | PPDB Motif | GGGACCC  | PLACE Motif |   | ||||
OsREG651 | GTCCCACC | PPDB Motif | GGGACCC  | PLACE Motif |   | ||||
OsREG514 | CCCACCTG | PPDB Motif | GCCCA  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |