PlantPromoterDB promoter information of 016-051-B08
Summary of Gene (016-051-B08)
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Overview
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Focused view (chromosome 8: 1564183-1565382)
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Genome position
from initiation codon 015-032-F08 AK065217 AK102015 J013002G10 J013152E01 J023007G24 J023019F17 J023074N19 J023120E22 J023120J05 J023125E14 J023145J12 J033080E11 J033087G05 J033092G02 J065019M06 J065029J04 J065031G24 J065043J15 J065049A17 J065055N20 J065062O05 J065083A02 J065086H21 J065109F15 J065121C11 J065132J19 J065135C06 J065194N14 J065201A20 J080305O17 J080306M18 J080309D04 J100027B05 J100036C02 J100043G09 J100048A10 J100056I17 J100062N21 J100064N15 J100082K15 TSS from cDNA TSS information 016-051-B08 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of 016-051-B08
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||