Summary of Gene (AK073102)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon J033051I24 J065104A15 TSS from cDNA TSS information AK073102 5'->3' (-) Promoter sequence TSS from cDNA TSS information 3'->5' (+) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | A | clone | - | 2363058 | -891 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | GGCCCGCA | - | 2363111 | 2363118 | -944 | -951 | |||
OsREG632 | GGCCCGCA | PPDB Motif |   | PLACE Motif |   | ||||
REG | AAACGGCCCGTT | - | 2363126 | 2363137 | -959 | -970 | |||
OsREG420 | AAACGGCC | PPDB Motif | AAACG(C/G)  | PLACE Motif |   | ||||
OsREG423 | AACGGCCC | PPDB Motif | GCCCA, AAACG(C/G)  | PLACE Motif |   | ||||
OsREG446 | ACGGCCCG | PPDB Motif | ACGGGC  | PLACE Motif |   | ||||
OsREG424 | GGCCCGTT | PPDB Motif | AAACG(C/G), ACGGGC, CCAACGG  | PLACE Motif |   | ||||
REG | TTGTGGGCCTC | - | 2363140 | 2363150 | -973 | -983 | |||
OsREG597 | TTGTGGGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG627 | TGTGGGCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG472 | GTGGGCCT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG587 | TGGGCCTC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | TGAGGGACCCG | - | 2363262 | 2363272 | -1095 | -1105 | |||
OsREG652 | TGAGGGAC | PPDB Motif | GGGACCC  | PLACE Motif |   | ||||
OsREG569 | GGGACCCG | PPDB Motif | GGGACCC  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |