Summary of Gene (AK103570)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon AK061986 J013073E16 J013134M05 J023020K13 J033132M15 J065184B06 J100037C20 Os01g0766501 TSS from cDNA TSS information AK103570 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | G | clone | + | 34054739 | -92 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | GCCGGCCC | + | 34054441 | 34054448 | -390 | -383 | |||
OsREG615 | GCCGGCCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | ATCCAACGG | + | 34054475 | 34054483 | -356 | -348 | |||
OsREG481 | ATCCAACG | PPDB Motif | CCAACGG  | PLACE Motif |   | ||||
OsREG548 | TCCAACGG | PPDB Motif | CCAACGG  | PLACE Motif |   | ||||
REG | GTCCCACCAC | + | 34054505 | 34054514 | -326 | -317 | |||
OsREG651 | GTCCCACC | PPDB Motif | GGGACCC  | PLACE Motif |   | ||||
OsREG527 | CCCACCAC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | CCCACCTGT | + | 34054645 | 34054653 | -186 | -178 | |||
OsREG514 | CCCACCTG | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG436 | CCACCTGT | PPDB Motif |   | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |