Summary of Gene (AK103822)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon TSS from cDNA TSS information AK103822 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | A | clone | + | 23293457 | -301 |
TSS clone peak | G | clone | + | 23293737 | -21 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | TGTGGGCCCCACGCCTC | + | 23293399 | 23293415 | -359 | -343 | |||
OsREG627 | TGTGGGCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG640 | GTGGGCCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG647 | TGGGCCCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG641 | GGGCCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG631 | GGCCCCAC | PPDB Motif |   | PLACE Motif |   | ||||
OsREG572 | GCCCCACG | PPDB Motif |   | PLACE Motif |   | ||||
OsREG503 | CACGCCTC | PPDB Motif |   | PLACE Motif |   | ||||
REG | TGGTGGGCCCACCTG | + | 23293440 | 23293454 | -318 | -304 | |||
OsREG599 | TGGTGGGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG640 | GTGGGCCCAC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG628 | GGTGGGCCCACC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG476 | GCCCACCT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG514 | CCCACCTG | PPDB Motif | GCCCA  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |