Summary of Gene (AK120873)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon TSS from cDNA TSS information AK120873 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | G | clone | + | 21410470 | -4 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | TGAGGGAC | + | 21410212 | 21410219 | -262 | -255 | |||
OsREG652 | TGAGGGAC | PPDB Motif | GGGACCC  | PLACE Motif |   | ||||
REG | CCCATCCAGCCCATTA | + | 21410266 | 21410281 | -208 | -193 | |||
OsREG534 | CCCATCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG523 | CCAGCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG491 | CAGCCCAT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG432 | AGCCCATT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG610 | GCCCATTA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | GCCCAAAC | + | 21410302 | 21410309 | -172 | -165 | |||
OsREG593 | GCCCAAAC | PPDB Motif | GCCCA  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |