Summary of Gene (J013089N03)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon 012-067-A05 AK060932 AK062119 AK066918 AK070512 J023055B17 J090016G12 J100071L19 TSS from cDNA TSS information J013089N03 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
TSS clone peak | T | clone | + | 4301530 | AK060932 |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | TCAGCCCAAAT | + | 4301327 | 4301337 | AK060932 | ||||
OsREG657 | TCAGCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG511 | CAGCCCAA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG457 | AGCCCAAA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG493 | GCCCAAAT | PPDB Motif | GCCCA  | PLACE Motif |   |