PlantPromoterDB promoter information of J013127E01
Summary of Gene (J013127E01)
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Overview
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Focused view (chromosome 11: 3277714-3278913)
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Genome position
from initiation codon 009-156-F07 012-025-F01 012-089-A02 016-016-E08 AK073392 AK099225 AK101469 AY236158 D21299 J013034O21 J013052D02 J013152M22 J023013N11 J023038J11 J023054N21 J023129O18 J033034H24 J033041E13 J033050O09 J033093G05 J033094J17 J033112J24 J033113D05 J033120K10 J033121H19 J033129C08 J033133D21 J033140H24 J033142H24 J065020I18 J065058L01 J065059G22 J065212L09 J075047P09 J075063C18 J075076E07 J075077F14 J075086C22 J075161L09 J075177K20 J090007L06 J090010M02 J090013M20 J090044I15 J090045O06 J090060L04 J090061C17 J090062F10 J090066L03 J090089E13 J090096D21 J100039F12 J100053N06 TSS from cDNA TSS information J013127E01 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of J013127E01
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||