Type | Sequence | Score | Genome position | Gene model |
| | | Strand | Position | |
TSS clone peak | G | clone | + | 3187198 | AK064836, J033060H13, J033118E14, J043039J02, J043039N08, J023086E11, J023114B19, AK071081, J043030N04, J023013O19, J023044M05, J013041A17, J013088K24, AK064836, J013000F21, J013024G05, J013047F10, J023069G09, J023091I09, J033075P14, J033092E18, J033123C07, J013063J23, J023139I06, J013045F04, J013059O17, J013098G04, J013102E18, J013146H15, J023101D06, J023109B03, J023134F22, J033112I05, J090023J24, J090033H01, AK104859, J043003C01, J033101G23, J013119M18, J013149A14, J013046F04, J013059J07, J013123I19, J023048O03, J023049L17, J033084O05, J013060A20, J023091M19, J033118P04, J023003A05, J033087G04, AK100712, J013066D19, J013100I15, J023115H16, J090022G17, J090038A03, J090049E10, J090063E24, J100021G23, J100028P06, J100060L21, J100077D16, J090041O22, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J023060D22, J023060F20, J023113B14, J043024B21, J090020H22, J013045D10, J013035E12, J013102O09, J013069O08, J023150C02, J033058O11, J013051E10, J033033A14, J100088I09, J090014O14, J090080N12 |
TSS clone peak | C | clone | + | 3187235 | AK064836, J033060H13, J033118E14, J043039J02, J043039N08, J023086E11, J023114B19, AK071081, J043030N04, J023013O19, J023044M05, J013041A17, J013088K24, AK064836, J013000F21, J013024G05, J013047F10, J023069G09, J023091I09, J033075P14, J033092E18, J033123C07, J013063J23, J023139I06, J013045F04, J013059O17, J013098G04, J013102E18, J013146H15, J023101D06, J023109B03, J023134F22, J033112I05, J090023J24, J090033H01, AK104859, J043003C01, J033101G23, J013119M18, J013149A14, J013046F04, J013059J07, J013123I19, J023048O03, J023049L17, J033084O05, J013060A20, J023091M19, J033118P04, J023003A05, J033087G04, AK100712, J013066D19, J013100I15, J023115H16, J090022G17, J090038A03, J090049E10, J090063E24, J100021G23, J100028P06, J100060L21, J100077D16, J090041O22, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J023060D22, J023060F20, J023113B14, J043024B21, J090020H22, J013045D10, J013035E12, J013102O09, J013069O08, J023150C02, J033058O11, J013051E10, J033033A14, J100088I09, J090014O14, J090080N12 |
Type | Sequence | Annotation | Genome position | Gene model |
| | | Strand | Start | End | |
REG | CACGGCCCAGT | | + | 3186955 | 3186965 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG504 | CACGGCCC | | PPDB Motif | GCCCA  | PLACE Motif |   |
| OsREG445 | ACGGCCCA | | PPDB Motif | GCCCA  | PLACE Motif | AACAAAC  |
| OsREG565 | CGGCCCAG | | PPDB Motif | GCCCA  | PLACE Motif |   |
| OsREG454 | GGCCCAGT | | PPDB Motif | GCCCA  | PLACE Motif |   |
REG | CATCCCCC | | + | 3186968 | 3186975 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG516 | CATCCCCC | | PPDB Motif |   | PLACE Motif |   |
REG | CCCACTCT | | + | 3186998 | 3187005 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG455 | CCCACTCT | | PPDB Motif |   | PLACE Motif |   |
REG | CACACACC | | + | 3187028 | 3187035 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG499 | CACACACC | | PPDB Motif |   | PLACE Motif |   |
REG | CCCACCACGCGTCC | | + | 3187043 | 3187056 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG527 | CCCACCAC | | PPDB Motif | GCCCA  | PLACE Motif |   |
| OsREG443 | CCACGCGT | | PPDB Motif |   | PLACE Motif |   |
| OsREG442 | ACGCGTCC | | PPDB Motif |   | PLACE Motif |   |
REG | GCCCAGATCCAACGGCT | | + | 3187086 | 3187102 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG486 | GCCCAGAT | | PPDB Motif | GCCCA  | PLACE Motif |   |
| OsREG481 | ATCCAACG | | PPDB Motif | CCAACGG  | PLACE Motif |   |
| OsREG548 | TCCAACGG | | PPDB Motif | CCAACGG  | PLACE Motif |   |
| OsREG518 | CCAACGGC | | PPDB Motif | CCAACGG  | PLACE Motif |   |
| OsREG469 | CAACGGCT | | PPDB Motif | CCAACGG  | PLACE Motif |   |
REG | CATCCCCCA | | + | 3187110 | 3187118 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG516 | CATCCCCC | | PPDB Motif |   | PLACE Motif |   |
| OsREG482 | ATCCCCCA | | PPDB Motif |   | PLACE Motif |   |
REG | GTGACGTGGACCGGACGCGTCC | | + | 3187132 | 3187153 | AK064836, AK071081, AK100712, AK104859, J013000F21, J013024G05, J013035E12, J013041A17, J013045D10, J013045F04, J013046F04, J013047F10, J013051E10, J013059J07, J013059O17, J013060A20, J013063J23, J013066D19, J013069O08, J013088K24, J013098G04, J013100I15, J013102E18, J013102O09, J013119M18, J013123I19, J013146H15, J013149A14, J023003A05, J023013O19, J023044M05, J023048O03, J023049L17, J023060D22, J023060F20, J023069G09, J023086E11, J023091I09, J023091M19, J023101D06, J023109B03, J023113B14, J023114B19, J023115H16, J023134F22, J023139I06, J023150C02, J033033A14, J033058O11, J033060H13, J033075P14, J033084O05, J033087G04, J033092E18, J033101G23, J033112I05, J033118E14, J033118P04, J033123C07, J043003C01, J043024B21, J043030N04, J043039J02, J043039N08, J075006N21, J075008A16, J075018J16, J075023G04, J075134F18, J075181B05, J090014O14, J090020H22, J090022G17, J090023J24, J090033H01, J090038A03, J090041O22, J090049E10, J090063E24, J090080N12, J100021G23, J100028P06, J100060L21, J100077D16, J100088I09 |
| OsREG505 | GTGACGTG | | PPDB Motif | ACGT  | PLACE Motif | TGAC  |
| OsREG570 | CGTGGACC | | PPDB Motif |   | PLACE Motif |   |
| OsREG442 | GGACGCGTCC | | PPDB Motif |   | PLACE Motif |   |