PlantPromoterDB promoter information of J065079B08
Summary of Gene (J065079B08)
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Overview
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Focused view (chromosome 3: 34589825-34588626)
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Genome position
AK063932 AK103496 AK122072 J033117M21 J033131A04 J065109O03 J065121K05 J065136D04 J080001M11 J080002H18 J080005I08 J080006B05 J080006D17 J080007M19 J080011E07 J080012H06 J080014D08 J080017D06 J080017K17 J080020B17 J080021O05 J080021O15 J080023I18 J080025A21 J080027P22 J080028M22 J080029B09 J080029M07 J080029M17 J080030H23 J080030K16 J080030L19 J080031A12 J080031N21 J080032G05 J080032P20 J080033H20 J080034H22 J080034J03 J080034J16 J080034N01 J080035K20 J080036I04 J080036I19 J080036O21 J080038D06 J080039J15 J080039P18 J080041H20 J080041M11 J080042F14 J080043G10 J080043J02 J080044C19 J080044G11 J080045M03 J080045N07 J080047K14 J080049I21 J080050A06 J080050I16 J080050N16 J080052C23 J080052D18 J080052F20 J080052F23 J080053M03 J080054G13 J080054H12 J080055N03 J080056E07 J080057L04 J080063O19 J080064E21 J080065D18 J080065F18 J080065H14 J080065K15 J080065M24 J080066B18 J080066B19 J080071H19 J080072E18 J080074K21 J080075B06 J080076H07 J080079D16 J080082B20 J080084N16 J080085L07 J080086L04 J080086M07 J080087D02 J080087D15 J080087J19 J080088G20 J080092M15 J080093O10 J080095L09 J080096A18 J080097C03 J090019J07 J090024N12 J090049I09 TSS from cDNA TSS information J065079B08 5'->3' (-) Promoter sequence TSS from cDNA TSS information 3'->5' (+) Promoter sequence |
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Promoter Summary of J065079B08
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||