Promoter Summary of J065121M02

TSS information

Type	Sequence	TPM score	Genome position		Position from initiation codon
			Strand	Position	Position
Not Available	Not Available	Not Available	Not Available		Not Available

TSS information from cDNA

Type	Sequence	Score	Genome position		Position from initiation codon
			Strand	Position	Position
TSS clone peak	A	clone	+	32089094	-396

Core promoter information

Type	Sequence	Genome position			Position from initiation codon
		Strand	Start	End	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	None	None			None
Y Patch	None	None			None
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Position from initiation codon
				Strand	Start	End	Start	End
REG		CGTCCGAT		+	32088804	32088811	-686	-679
	OsREG484	CGTCCGAT		PPDB Motif			PLACE Motif
REG		CGGACGGA		+	32088860	32088867	-630	-623
	OsREG561	CGGACGGA		PPDB Motif			PLACE Motif
REG		AACGGGCC		+	32088875	32088882	-615	-608
	OsREG424	AACGGGCC		PPDB Motif	AAACG(C/G), ACGGGC, CCAACGG		PLACE Motif
REG		AGCCCACGGG		+	32088886	32088895	-604	-595
	OsREG463	AGCCCACG		PPDB Motif	GCCCA		PLACE Motif
	OsREG547	GCCCACGG		PPDB Motif	GCCCA		PLACE Motif
	OsREG531	CCCACGGG		PPDB Motif	GCCCA, ACGGGC		PLACE Motif
REG		TCCGGCCCAAAC		+	32088910	32088921	-580	-569
	OsREG644	TCCGGCCC		PPDB Motif	GCCCA		PLACE Motif
	OsREG542	CCGGCCCA		PPDB Motif	GCCCA		PLACE Motif
	OsREG563	CGGCCCAA		PPDB Motif	GCCCA		PLACE Motif
	OsREG625	GGCCCAAA		PPDB Motif	GCCCA		PLACE Motif
	OsREG593	GCCCAAAC		PPDB Motif	GCCCA		PLACE Motif
REG		CCAAGCCCAAAA		+	32088968	32088979	-522	-511
	OsREG519	CCAAGCCC		PPDB Motif	GCCCA		PLACE Motif
	OsREG496	CAAGCCCA		PPDB Motif	GCCCA		PLACE Motif
	OsREG426	AAGCCCAA		PPDB Motif	GCCCA		PLACE Motif
	OsREG457	AGCCCAAA		PPDB Motif	GCCCA		PLACE Motif
	OsREG592	GCCCAAAA		PPDB Motif	GCCCA		PLACE Motif

Other Reliable Promoter Summary

TSS information

Type	Sequence	TPM score	Genome position		Gene model
			Strand	Position
Not Available	Not Available	Not Available	Not Available		Not Available

TSS information from cDNA

Type	Sequence	Score	Genome position		Gene model
			Strand	Position
Not Available	Not Available	Not Available	Not Available		Not Available

Core promoter information

Type	Sequence	Genome position			Gene model
		Strand	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	None	None			None
Y Patch	None	None			None
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Gene model
				Strand	Start	End
REG		None	None			None