PlantPromoterDB promoter information of J075031P09
Summary of Gene (J075031P09)
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Overview
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Focused view (chromosome 8: 17071680-17072879)
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Genome position
from initiation codon 009-121-H06 009-156-E04 AK061882 AK120339 J013060M10 J023081O13 J023135H23 J033095L23 J065010L09 J065016A02 J065040P10 J065041H14 J065043F09 J065045E03 J065058D03 J065058F23 J065068F20 J065075L19 J065078N12 J065089E11 J065105J19 J065162I03 J065164D10 J065170B05 J065172C15 J065218F06 J075011M06 J075038D14 J075039K19 J075039M06 J075057L17 J075059F17 J075104H19 J075109J04 J075118C23 J075120B14 J075153I11 J075156C19 J075166J20 J075170C06 J075173J21 J075182D17 J075189D21 J075196E02 J075199G22 J080319I05 J090043E13 J090052H04 J100017P07 J100033M11 J100034M11 J100051E13 J100057L03 J100059G23 J100072F15 J100074A21 J100076K21 J100081K08 TSS from cDNA TSS information J075031P09 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of J075031P09
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||