PlantPromoterDB promoter information of J075053J06
Summary of Gene (J075053J06)
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Overview
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Focused view (chromosome 1: 27016693-27017892)
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Genome position
from initiation codon AY028314 J023098M19 J065140A03 J075002A18 J075003D18 J075003P22 J075007P04 J075008H02 J075008O09 J075009D14 J075013C23 J075014O17 J075015C06 J075017E04 J075017O07 J075021H02 J075025G20 J075027G04 J075035O08 J075041F14 J075041F19 J075045E23 J075048J21 J075048L20 J075049M07 J075051M12 J075052N24 J075055D04 J075055K03 J075056A07 J075058A14 J075059K06 J075061E18 J075063N02 J075068L23 J075071D03 J075073L08 J075074F14 J075074F24 J075081O03 J075084C14 J075091G09 J075093A21 J075095N05 J075099C15 J075103N15 J075105I16 J075108N04 J075109D05 J075109E10 J075112E18 J075114A14 J075115H10 J075119K11 J075119M22 J075122H16 J075125G02 J075125H04 J075127N21 J075129N05 J075132I23 J075135L05 J075136K13 J075136O20 J075138L11 J075144L17 J075147C20 J075150D05 J075150O06 J075153J16 J075156D14 J075160D11 J075161H09 J075162L05 J075165A03 J075166G11 J075166N20 J075166O07 J075169F09 J075169H14 J075173I07 J075177J22 J075179C10 J075179N14 J075181L14 J075181M16 J075187P07 J075189G12 J075190L05 J090008P12 J090010I17 J090011G03 J090018C10 J090022D16 J090022P06 J090034C10 J090039K11 J090046K13 J090047C22 J090049M10 J090051C20 J090053C08 J090055C03 J090061A13 J090063I06 J090073D22 J090073K07 J090079F22 J090084D24 J090093A06 J090094L11 J090099F10 J090099M20 U66041 TSS from cDNA TSS information J075053J06 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of J075053J06
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||