PlantPromoterDB promoter information of J075094H10
Summary of Gene (J075094H10)
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Overview
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Focused view (chromosome 7: 5769389-5770588)
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Genome position
from initiation codon J075001N20 J075001P11 J075002L06 J075003F12 J075003J06 J075003L17 J075003N05 J075006B02 J075006M11 J075007N09 J075008J10 J075008K05 J075008L18 J075009G10 J075010L05 J075010M10 J075011E23 J075012N03 J075013H12 J075013K22 J075014A01 J075014B06 J075014D21 J075014L11 J075014N12 J075014P20 J075015K03 J075016F09 J075016L02 J075018N17 J075020C21 J075020O19 J075021J10 J075022I09 J075023C24 J075024D05 J075024F03 J075024G19 J075024K21 J075025H18 J075026K22 J075027C01 J075027I07 J075028F04 J075028F13 J075028G09 J075028H17 J075028I18 J075028I20 J075029O15 J075030B21 J075030I05 J075030N15 J075031I16 J075032B15 J075032C07 J075032G21 J075032M14 J075033H12 J075034J02 J075035B12 J075035C03 J075036M08 J075037B08 J075037P16 J075038J15 J075038M04 J075039I10 J075039M13 J075040B12 J075041C04 J075041G09 J075041L14 J075042J22 J075043F24 J075043K08 J075043N10 J075044D17 J075044G02 J075044N23 J075045G17 J075045M10 J075046L02 J075047B14 J075047I02 J075048B20 J075048E06 J075048O09 J075049E15 J075050A01 J075050C16 J075050D06 J075051A07 J075051H16 J075052E07 J075052O07 J075053L23 J075054B13 J075054H01 J075054M13 J075055E05 J075055H14 J075056P11 J075057H18 J075058E19 J075058K22 J075058N16 J075059J23 J075060G15 J075060J04 J075061H13 J075062B11 J075063E01 J075064B01 J075065H08 J075066C13 J075066F21 J075066K03 J075066M07 J075067G13 J075069A04 J075069A11 J075069H17 J075069O08 J075070C21 J075072A05 J075072C02 J075072H04 J075072K02 J075073B08 J075073C14 J075073L03 J075073L13 J075073L23 J075073O09 J075074A06 J075076A17 J075076C19 J075076L11 J075076P09 J075077A01 J075078H12 J075079H21 J075079N06 J075080B04 J075080F10 J075080F21 J075081C14 J075081F21 J075081H04 J075081H09 J075081I11 J075082D13 J075082G20 J075082L18 J075082P13 J075083N03 J075084B15 J075084N11 J075085K12 J075086D22 J075087B19 J075087M08 J075088A04 J075088D08 J075088L17 J075089I12 J075089J02 J075089K11 J075089N11 J075090F02 J075090K16 J075091F18 J075091M16 J075091O20 J075092F10 J075092L02 J075092M22 J075093N07 J075095B19 J075095L12 J075096G17 J075096I06 J075096N01 J075096N02 J075096N23 J075097I07 J075097N23 J075098A02 J075098C07 J075098M03 J075099B08 J075100D16 J075102P03 J075104B07 J075104D03 J075105C22 J075106C12 J075108I21 J075108I23 J075108J17 J075109A16 J075109B01 J075109F14 J075110A08 J075110J03 J075111E01 J075112C23 J075112J02 J075112P08 J075114A03 J075114B15 J075114N18 J075115L01 J075115M18 J075115P15 J075117M14 J075118K24 J075119E16 J075119G20 J075119L18 J075120A08 J075120D20 J075120M08 J075121D02 J075121F20 J075121H12 J075121O09 J075122G03 J075122K17 J075123D20 J075124H15 J075124M13 J075125B18 J075126L07 J075126L16 J075127J15 J075127O09 J075128E12 J075128N10 J075129A07 J075129G01 J075129I05 J075131L07 J075131O03 J075132C02 J075132M03 J075133K08 J075133O09 J075133O16 J075134D09 J075135C09 J075136B02 J075136C04 J075136F05 J075136G23 J075136K01 J075136K17 J075136P14 J075137A15 J075137C18 J075137E07 J075138C10 J075138H04 J075139H09 J075139M17 J075140G12 J075140I10 J075140L01 J075140O21 J075140P13 J075141G04 J075141H12 J075142F01 J075142F19 J075143B01 J075143D06 J075143D23 J075143G20 J075143I21 J075143M20 J075144K02 J075145A15 J075145M07 J075146E20 J075146H12 J075146K20 J075147N22 J075148E02 J075148H05 J075148H12 J075149B04 J075150B07 J075151M16 J075151N15 J075151O15 J075152G22 J075156H11 J075156N17 J075156N19 J075157D12 J075157L21 J075160H09 J075160L15 J075161A21 J075161L03 J075161M14 J075162C15 J075162L08 J075164F20 J075165E11 J075166D16 J075166J04 J075168D14 J075169D04 J075169G19 J075169H09 J075170N03 J075170P06 J075173D11 J075173L06 J075173L20 J075174E13 J075174I11 J075175A22 J075175B18 J075176C03 J075176G22 J075176J11 J075177F05 J075177F23 J075177G01 J075179C06 J075180M01 J075181D19 J075183J08 J075184F15 J075184L08 J075184L18 J075185K17 J075185O03 J075186N01 J075187F15 J075187M03 J075188A22 J075190B10 J075190D17 J075190G19 J075193A03 J075193E19 J075193F06 J075193F14 J075194P15 J075195F15 J075195F19 J075195H11 J075195M04 J075195O14 J075196A04 J075196L17 J075196M17 J075198H14 J075199C09 J090087H18 X14392 TSS from cDNA TSS information J075094H10 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of J075094H10
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| TSS clone peak | A | clone | + | 5769029 | -60 |
| TSS clone peak | A | clone | + | 5769032 | -57 |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | TCTATAAATA | + | 5768997 | 5769006 | -92 | -83 |
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||