Promoter Summary of J075118O17

TSS information

Type	Sequence	TPM score	Genome position		Position from initiation codon
			Strand	Position	Position
Not Available	Not Available	Not Available	Not Available		Not Available

TSS information from cDNA

Type	Sequence	Score	Genome position		Position from initiation codon
			Strand	Position	Position
TSS clone peak	A	clone	+	5774003	-56

Core promoter information

Type	Sequence	Genome position			Position from initiation codon
		Strand	Start	End	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	TCTATAAATA	+	5773968	5773977	-91	-82
Y Patch	None	None			None
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Position from initiation codon
				Strand	Start	End	Start	End
REG		TGATGGGC		+	5773824	5773831	-235	-228
	OsREG607	TGATGGGC		PPDB Motif	GCCCA		PLACE Motif

Other Reliable Promoter Summary

TSS information

Type	Sequence	TPM score	Genome position		Gene model
			Strand	Position
Not Available	Not Available	Not Available	Not Available		Not Available

TSS information from cDNA

Type	Sequence	Score	Genome position		Gene model
			Strand	Position
Not Available	Not Available	Not Available	Not Available		Not Available

Core promoter information

Type	Sequence	Genome position			Gene model
		Strand	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	TCTATAAATA	+	5768997	5769006	J075001L23, J075001N20, J075001P11, J075002L06, J075003F12, J075003J06, J075003L17, J075003N05, J075006B02, J075006M11, J075007N09, J075008J10, J075008K05, J075008L18, J075009G10, J075010L05, J075010M10, J075011E23, J075012N03, J075013H12, J075013K22, J075014A01, J075014B06, J075014D21, J075014L11, J075014N12, J075014P20, J075015K03, J075016F09, J075016L02, J075018N17, J075020C21, J075020O19, J075021J10, J075022I09, J075023C24, J075024D05, J075024F03, J075024G19, J075024K21, J075025H18, J075026K22, J075027C01, J075027I07, J075028F04, J075028F13, J075028G09, J075028H17, J075028I18, J075028I20, J075029O15, J075030B21, J075030I05, J075030N15, J075031I16, J075032B15, J075032C07, J075032G21, J075032M14, J075033H12, J075034J02, J075035B12, J075035C03, J075036M08, J075037B08, J075037P16, J075038J15, J075038M04, J075039I10, J075039M13, J075040B12, J075041C04, J075041G09, J075041L14, J075042J22, J075043F24, J075043K08, J075043N10, J075044D17, J075044G02, J075044N23, J075045G17, J075045M10, J075046L02, J075047B14, J075047I02, J075048B20, J075048E06, J075048O09, J075049E15, J075050A01, J075050C16, J075050D06, J075051A07, J075051H16, J075052E07, J075052O07, J075053L23, J075054B13, J075054H01, J075054M13, J075055E05, J075055H14, J075056P11, J075057H18, J075058E19, J075058K22, J075058N16, J075059J23, J075060G15, J075060J04, J075061H13, J075062B11, J075063E01, J075064B01, J075065H08, J075066C13, J075066F21, J075066K03, J075066M07, J075067G13, J075069A04, J075069A11, J075069H17, J075069O08, J075070C21, J075072A05, J075072C02, J075072H04, J075072K02, J075073B08, J075073C14, J075073L03, J075073L13, J075073L23, J075073O09, J075074A06, J075076A17, J075076C19, J075076L11, J075076P09, J075077A01, J075078H12, J075079H21, J075079N06, J075080B04, J075080F10, J075080F21, J075081C14, J075081F21, J075081H04, J075081H09, J075081I11, J075082D13, J075082G20, J075082L18, J075082P13, J075083N03, J075084B15, J075084N11, J075085K12, J075086D22, J075087B19, J075087M08, J075088A04, J075088D08, J075088L17, J075089I12, J075089J02, J075089K11, J075089N11, J075090F02, J075090K16, J075091F18, J075091M16, J075091O20, J075092F10, J075092L02, J075092M22, J075093N07, J075094H10, J075095B19, J075095L12, J075096G17, J075096I06, J075096N01, J075096N02, J075096N23, J075097I07, J075097N23, J075098A02, J075098C07, J075098M03, J075099B08, J075100D16, J075102P03, J075104B07, J075104D03, J075105C22, J075106C12, J075108I21, J075108I23, J075108J17, J075109A16, J075109B01, J075109F14, J075110A08, J075110J03, J075111E01, J075112C23, J075112J02, J075112P08, J075114A03, J075114B15, J075114N18, J075115L01, J075115M18, J075115P15, J075117M14, J075118K24, J075119E16, J075119G20, J075119L18, J075120A08, J075120D20, J075120M08, J075121D02, J075121F20, J075121H12, J075121O09, J075122G03, J075122K17, J075123D20, J075124H15, J075124M13, J075125B18, J075126L07, J075126L16, J075127J15, J075127O09, J075128E12, J075128N10, J075129A07, J075129G01, J075129I05, J075131L07, J075131O03, J075132C02, J075132M03, J075133K08, J075133O09, J075133O16, J075134D09, J075135C09, J075136B02, J075136C04, J075136F05, J075136G23, J075136K01, J075136K17, J075136P14, J075137A15, J075137C18, J075137E07, J075138C10, J075138H04, J075139H09, J075139M17, J075140G12, J075140I10, J075140L01, J075140O21, J075140P13, J075141G04, J075141H12, J075142F01, J075142F19, J075143B01, J075143D06, J075143G20, J075143I21, J075143M20, J075144K02, J075145A15, J075145M07, J075146E20, J075146H12, J075146K20, J075147N22, J075148E02, J075148H05, J075148H12, J075149B04, J075150B07, J075151M16, J075151N15, J075151O15, J075152G22, J075156H11, J075156N17, J075156N19, J075157D12, J075157L21, J075160H09, J075160L15, J075161A21, J075161L03, J075161M14, J075162C15, J075162L08, J075164F20, J075165E11, J075166D16, J075166J04, J075168D14, J075169D04, J075169G19, J075169H09, J075170N03, J075170P06, J075173D11, J075173L06, J075173L20, J075174E13, J075174I11, J075175B18, J075176C03, J075176G22, J075176J11, J075177F05, J075177F23, J075177G01, J075179C06, J075180M01, J075181D19, J075183J08, J075184F15, J075184L08, J075184L18, J075185K17, J075185O03, J075186N01, J075187F15, J075187M03, J075188A22, J075190B10, J075190D17, J075190G19, J075193A03, J075193E19, J075193F06, J075193F14, J075194P15, J075195F15, J075195F19, J075195H11, J075195M04, J075195O14, J075196A04, J075196L17, J075196M17, J075198H14, J075199C09, J090087H18, X14392
Y Patch	None	None			None
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Gene model
				Strand	Start	End
REG		None	None			None