Summary of Gene (J075127A16)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon J075092I17 TSS from cDNA TSS information J075127A16 5'->3' (-) Promoter sequence Os03g0270400 TSS from cDNA TSS information 3'->5' (+) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | G | clone | - | 9085954 | -104 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | TCGGCCCACGT | - | 9086055 | 9086065 | -205 | -215 | |||
OsREG658 | TCGGCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG564 | CGGCCCAC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG571 | GGCCCACG | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG449 | GCCCACGT | PPDB Motif | GCCCA, ACGT  | PLACE Motif | ACGTSSSC  | ||||
REG | GAAGCCCATT | - | 9086077 | 9086086 | -227 | -236 | |||
OsREG582 | GAAGCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG429 | AAGCCCAT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG432 | AGCCCATT | PPDB Motif | GCCCA  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |