Summary of Gene (J080018O22)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon TSS from cDNA TSS information J080018O22 5'->3' (-) Promoter sequence Os12g0275000 TSS from cDNA TSS information 3'->5' (+) Promoter sequence |
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | A | clone | - | 10080501 | -59 |
TSS clone peak | A | clone | - | 10080498 | -56 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | CCGATCCG | - | 10080546 | 10080553 | -104 | -111 | |||
OsREG541 | CCGATCCG | PPDB Motif |   | PLACE Motif |   | ||||
REG | CCACGGCC | - | 10080685 | 10080692 | -243 | -250 | |||
OsREG521 | CCACGGCC | PPDB Motif |   | PLACE Motif |   | ||||
REG | GCCCATCA | - | 10080766 | 10080773 | -324 | -331 | |||
OsREG607 | GCCCATCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | ACCCGCGC | - | 10080775 | 10080782 | -333 | -340 | |||
OsREG439 | ACCCGCGC | PPDB Motif |   | PLACE Motif |   | ||||
REG | CCCATCCA | - | 10080788 | 10080795 | -346 | -353 | |||
OsREG534 | CCCATCCA | PPDB Motif | GCCCA  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |