Summary of Gene (J090094K13)
|
Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon J013095G13 J013128E08 J023072N21 J023083D13 J023090E24 J023097A14 J023130H06 J033052I04 J033066K22 J033071G04 J033089J21 J033090L16 J033100P19 J033102C11 J033124H23 J033129E23 J043003I16 J090029J24 J090033P05 J090068G20 TSS from cDNA TSS information J090094K13 5'->3' (+) Promoter sequence TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
|
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | G | clone | + | 15521100 | -734 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | CAAGCCCATT | + | 15520925 | 15520934 | -909 | -900 | |||
OsREG496 | CAAGCCCA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG429 | AAGCCCAT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
OsREG432 | AGCCCATT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | ACCCCCCA | + | 15521032 | 15521039 | -802 | -795 | |||
OsREG438 | ACCCCCCA | PPDB Motif |   | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |