PlantPromoterDB promoter information of J090095I01
Summary of Gene (J090095I01)
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Overview
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Focused view (chromosome 4: 25312405-25313604)
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Genome position
from initiation codon 011-053-C04 AK067166 AK072162 AK098918 AK100589 J013002M21 J013032O08 J013036P09 J013040A18 J013040P15 J013047I24 J013057K23 J013071K06 J013075N17 J013100C20 J013102K20 J013108H11 J013119H18 J013119L16 J013129E09 J013129L10 J013134O22 J013151B03 J013155M19 J013170N11 J023001A10 J023002F19 J023010D08 J023030D04 J023031A05 J023031O21 J023050E10 J023056D09 J023065G21 J023074B22 J023081I24 J023083D15 J023087D24 J023090E11 J023090F06 J023110L19 J023114A05 J023114J23 J023119G18 J023127G22 J023141J20 J023141L13 J033023I11 J033025D01 J033034C13 J033035A16 J033038J19 J033040E15 J033040H12 J033042L22 J033043O13 J033044I04 J033045D07 J033057O15 J033073D07 J033086E09 J033086H13 J033086H21 J033086K18 J033091I22 J033091J02 J033098F12 J033099H08 J033116H15 J033119M02 J033124G16 J033131C06 J033147D18 J043016N12 J043026E15 J043040M19 J065069O17 J065081E10 J065105B13 J090016O15 J090028D20 J090028M24 J090038B19 J090038O08 J090042P20 J090049M13 J090056J04 J090060I19 J090062M17 J090071E22 J090072P06 J090080F18 J090098F02 J100025G12 J100029M21 J100034L23 J100043I19 J100078N20 J100080K04 J100090G16 J100090P06 TSS from cDNA TSS information J090095I01 5'->3' (+) Promoter sequence AK065472
J013020B04 J065053C01 TSS from cDNA TSS information 3'->5' (-) Promoter sequence |
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Promoter Summary of J090095I01
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | None | None | None | ||||||