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Summary of GO:0005578 (All List)

Organism Arabidopsis thaliana
GO ID GO:0005578
Namespace Component
Name extracellular matrix
Description A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.

Entry Genes (6 entries)

LocusGene modelDescription
AT1G59970AT1G59970.1matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10A and M12B, matrixin and adamalysin (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase, metallopeptidases (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrixin family protein (TAIR:AT1G24140.1); Has 2181 Blast hits to 2001 proteins in 159 species: Archae - 2; Bacteria - 62; Metazoa - 1907; Fungi - 4; Plants - 83; Viruses - 37; Other Eukaryotes - 86 (source: NCBI BLink). 
AT1G70170AT1G70170.1mutant has Late flowering; Early senescence; Matrix Metalloproteinase 
AT1G75910AT1G75910.1member of Lipase proteins 
AT1G75930AT1G75930.1member of Lipase proteins 
AT2G45040AT2G45040.1matrix metalloproteinase; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10A and M12B, matrixin and adamalysin (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase, metallopeptidases (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase, putative (TAIR:AT4G16640.1); Has 2158 Blast hits to 1979 proteins in 152 species: Archae - 2; Bacteria - 47; Metazoa - 1902; Fungi - 3; Plants - 81; Viruses - 39; Other Eukaryotes - 84 (source: NCBI BLink). 
AT4G16640AT4G16640.1matrix metalloproteinase, putative; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10A and M12B, matrixin and adamalysin (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase, metallopeptidases (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT2G45040.1); Has 2200 Blast hits to 2021 proteins in 162 species: Archae - 2; Bacteria - 79; Metazoa - 1899; Fungi - 3; Plants - 83; Viruses - 39; Other Eukaryotes - 95 (source: NCBI BLink). 


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