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Summary of This Tissue Information (All List)

Organism Arabidopsis thaliana
Tissue Seed
Total Entry Count 19

Entry Genes (19 entries)

LocusGene modelDescription
AT1G46768
(UniProt:RAP21_ARATH)
AT1G46768.1encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10. 
AT1G64780
(UniProt:AMT12_ARATH)
AT1G64780.1encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root. 
AT1G75830
(UniProt:DEF13_ARATH)
AT1G75830.1Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. 
AT3G23990
(UniProt:CH60A_ARATH)
AT3G23990.1mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. 
AT3G24300
(UniProt:AMT13_ARATH)
AT3G24300.1Encodes a plasma membrane localized ammonium transporter. 
AT3G44340
(UniProt:SC24C_ARATH)
AT3G44340.1homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions. 

(UniProt:SC24C_ARATH)
AT3G44340.2homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions. 
AT3G44990
(UniProt:XTH31_ARATH)
AT3G44990.1xyloglucan endo-transglycosylase 
AT3G48170
(UniProt:BADH2_ARATH)
AT3G48170.1Arabidopsis thaliana putative betaine aldehyde dehydrogenase 
AT3G52340
(UniProt:SPP3B_ARATH)
AT3G52340.1sucrose-phosphatase (SPP2) 

(UniProt:SPP3B_ARATH)
AT3G52340.2sucrose-phosphatase (SPP2) 

(UniProt:SPP3B_ARATH)
AT3G52340.3sucrose-phosphatase (SPP2) 
AT3G54270
(UniProt:SPP3A_ARATH)
AT3G54270.1sucrose-phosphatase 3 (SPP3); FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant and cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (SPP1) (TAIR:AT2G35840.2); Has 462 Blast hits to 456 proteins in 164 species: Archae - 9; Bacteria - 285; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). 
AT4G06746
(UniProt:RAP29_ARATH)
AT4G06746.1encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10. 
AT4G09600
(UniProt:GASA3_ARATH)
AT4G09600.1One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato. 
AT4G09610
(UniProt:GASA2_ARATH)
AT4G09610.1GAST1 PROTEIN HOMOLOG 2 (GASA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GASA3 (GAST1 PROTEIN HOMOLOG 3) (TAIR:AT4G09600.1); Has 250 Blast hits to 250 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 
AT4G28270
(UniProt:P93030_ARATH)
AT4G28270.1zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding (TAIR:AT4G03510.2); Has 1997 Blast hits to 1997 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1237; Fungi - 227; Plants - 319; Viruses - 9; Other Eukaryotes - 205 (source: NCBI BLink). 
AT5G52640
(UniProt:HSP81_ARATH)
AT5G52640.1Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. 
AT5G54680
(UniProt:ILR3_ARATH)
AT5G54680.1iaa-leucine resistant3 (ILR3); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) family protein (TAIR:AT1G51070.1); Has 563 Blast hits to 555 proteins in 74 species: Archae - 4; Bacteria - 10; Metazoa - 69; Fungi - 13; Plants - 431; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). 


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