Summary of Gene (AT1G76180.1)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon TSS from cDNA TSS information AT1G76180.1 5'->3' (-) Promoter sequence TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS peak | A | 92 | - | 28587753 | -96 |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | C | clone | - | 28587770 | -113 |
TSS clone | T | clone | - | 28587755 | -98 |
TSS clone | A | clone | - | 28587753 | -96 |
TSS clone | C | clone | - | 28587752 | -95 |
TSS clone | T | clone | - | 28587750 | -93 |
TSS clone | T | clone | - | 28587745 | -88 |
TSS clone | T | clone | - | 28587744 | -87 |
TSS clone | C | clone | - | 28587741 | -84 |
TSS clone | A | clone | - | 28587740 | -83 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | CACTATATAAC | - | 28587778 | 28587788 | -121 | -131 |
Y Patch | CTTTCTTCTCT | - | 28587764 | 28587774 | -107 | -117 |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |