Summary of Gene (AT3G06778.1)
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Overview |
Genome position
from initiation codon AT3G06770.2 AT3G06770.3 TSS from cDNA TSS information AT3G06778.1 5'->3' (-) Promoter sequence TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone peak | A | clone | - | 2141523 | -86 |
TSS clone peak | A | clone | - | 2141522 | -85 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
TSS peak | A | 8 | - | 2137334 | AT3G06770.3, AT3G06770.1, AT3G06770.2 |
TSS peak | G | 5 | - | 2137122 | AT3G06770.3, AT3G06770.1, AT3G06770.2 |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
TSS clone | T | clone | - | 2137129 | AT3G06770.3, AT3G06770.1, AT3G06770.2 |
TSS clone | T | clone | - | 2136977 | AT3G06770.3, AT3G06770.1 |
TSS clone | G | clone | - | 2136962 | AT3G06770.3, AT3G06770.1 |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | TCTTTCTCTTCTTCTTCTCTCTCTCTCTCTCTCT | - | 2137123 | 2137156 | AT3G06770.1, AT3G06770.2, AT3G06770.3 | |
Y Patch | TCCTTCTCCTTCT | - | 2137160 | 2137172 | AT3G06770.1, AT3G06770.2, AT3G06770.3 | |
Y Patch | CTTTCTTCT | - | 2137303 | 2137311 | AT3G06770.1, AT3G06770.2, AT3G06770.3 | |
Y Patch | TCTTCTTCCTTC | - | 2137321 | 2137332 | AT3G06770.1, AT3G06770.2, AT3G06770.3 | |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |