Promoter Summary of AT3G09385.1

TSS information

Type	Sequence	TPM score	Genome position		Position from initiation codon
			Strand	Position	Position
Not Available	Not Available	Not Available	Not Available		Not Available

TSS information from cDNA

Type	Sequence	Score	Genome position		Position from initiation codon
			Strand	Position	Position
Not Available	Not Available	Not Available	Not Available		Not Available

Core promoter information

Type	Sequence	Genome position			Position from initiation codon
		Strand	Start	End	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	None	None			None
Y Patch	None	None			None
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Position from initiation codon
				Strand	Start	End	Start	End
REG		None	None			None

Other Reliable Promoter Summary

TSS information

Type	Sequence	TPM score	Genome position		Gene model
			Strand	Position
TSS peak	A	5	+	2871141	AT3G09350.1, AT3G09350.2, AT3G09350.3

TSS information from cDNA

Type	Sequence	Score	Genome position		Gene model
			Strand	Position
TSS clone	C	clone	+	2871127	AT3G09350.1, AT3G09350.2, AT3G09350.3
TSS clone	T	clone	+	2871128	AT3G09350.1, AT3G09350.2, AT3G09350.3
TSS clone	A	clone	+	2871133	AT3G09350.1, AT3G09350.2, AT3G09350.3
TSS clone	T	clone	+	2871134	AT3G09350.1, AT3G09350.2, AT3G09350.3
TSS clone	T	clone	+	2871181	AT3G09350.1, AT3G09350.2, AT3G09350.3

Core promoter information

Type	Sequence	Genome position			Gene model
		Strand	Start	End
initiator	Not Available	Not Available			Not Available
TATA Box	None	None			None
Y Patch	CTCTTCCTCT	+	2871121	2871130	AT3G09350.1, AT3G09350.2, AT3G09350.3
Y Patch	TTTCTTCTTCT	+	2871169	2871179	AT3G09350.1, AT3G09350.2, AT3G09350.3
GA	None	None			None
Inr	None	None			None

REG information

Type		Sequence	Annotation	Genome position			Gene model
				Strand	Start	End
REG		AAAGTCAA		+	2870847	2870854	AT3G09350.1, AT3G09350.2, AT3G09350.3
	AtREG632	AAAGTCAA		PPDB Motif			PLACE Motif	TTGAC
REG		CGTGGCAT		+	2870865	2870872	AT3G09350.1, AT3G09350.2, AT3G09350.3
	AtREG448	CGTGGCAT	ABA, DREB1Aox	PPDB Motif			PLACE Motif	GCCAC
REG		TAAGCCCAATAA		+	2870933	2870944	AT3G09350.1, AT3G09350.2, AT3G09350.3
	AtREG426	TAAGCCCA		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
	AtREG407	AAGCCCAA		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
	AtREG402	AGCCCAAT		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
	AtREG355	GCCCAATA		PPDB Motif	GCCCA		PLACE Motif
	AtREG417	CCCAATAA		PPDB Motif	GCCCA		PLACE Motif
REG		ATTTGGGCTTG		+	2870954	2870964	AT3G09350.1, AT3G09350.2, AT3G09350.3
	AtREG421	ATTTGGGC		PPDB Motif	GCCCA		PLACE Motif
	AtREG469	TTTGGGCT		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
	AtREG407	TTGGGCTT		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
	AtREG525	TGGGCTTG		PPDB Motif	GCCCA		PLACE Motif	TGGGCY
REG		TTAAAGGCCCAATT		+	2870969	2870982	AT3G09350.1, AT3G09350.2, AT3G09350.3
	AtREG639	TTAAAGGC		PPDB Motif	AAACG(C/G)		PLACE Motif
	AtREG467	TAAAGGCC		PPDB Motif			PLACE Motif
	AtREG359	AAAGGCCC		PPDB Motif	GCCCA		PLACE Motif	GGGCC
	AtREG353	AAGGCCCA		PPDB Motif	GCCCA		PLACE Motif	GGGCC, TGGGCY
	AtREG356	AGGCCCAA		PPDB Motif	GCCCA		PLACE Motif	GGGCC, TGGGCY
	AtREG352	GGCCCAAT		PPDB Motif	GCCCA		PLACE Motif	GGGCC, TGGGCY
	AtREG418	GCCCAATT		PPDB Motif	GCCCA		PLACE Motif