Summary of Gene (AT3G14330.1)
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Overview![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Genome position
from initiation codon AT3G14350.2 AT3G14350.3 TSS from cDNA TSS information AT3G14330.1 5'->3' (-) Promoter sequence AT3G14340.1
TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS peak | G | 4 | - | 4783372 | -921 |
TSS peak | A | 8 | - | 4783011 | -560 |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | TCCCTCTCC | - | 4783358 | 4783366 | -907 | -915 |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | AGATGGGC | - | 4783443 | 4783450 | -992 | -999 | |||
AtREG572 | AGATGGGC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | TTTAACCGGAA | - | 4783600 | 4783610 | -1149 | -1159 | |||
AtREG645 | TTTAACCG | PPDB Motif | AACCG(G/A)  | PLACE Motif | CNGTTR  | ||||
AtREG501 | TTAACCGG | PPDB Motif | AACCG(G/A)  | PLACE Motif | CNGTTR  | ||||
AtREG621 | TAACCGGA | PPDB Motif | AACCG(G/A)  | PLACE Motif | CNGTTR  | ||||
AtREG534 | AACCGGAA | PPDB Motif | AACCG(G/A)  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |