Summary of Gene (AT3G59360.1)
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Overview |
Genome position
from initiation codon TSS from cDNA TSS information AT3G59360.1 5'->3' (-) Promoter sequence AT3G59380.1
TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | T | clone | - | 21940244 | -602 |
TSS clone peak | T | clone | - | 21940241 | -599 |
TSS clone | A | clone | - | 21940197 | -555 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | GTAAGGCC | + | 21943427 | 21943434 | AT3G59380.1 | ||||
AtREG530 | GTAAGGCC | PPDB Motif |   | PLACE Motif |   | ||||
REG | TTAAAGCC | + | 21943656 | 21943663 | AT3G59380.1 | ||||
AtREG545 | TTAAAGCC | PPDB Motif |   | PLACE Motif |   |