Summary of Gene (AT3G61300.1)
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Overview |
Genome position
from initiation codon TSS from cDNA TSS information AT3G61300.1 5'->3' (+) Promoter sequence AT3G61330.1
TSS from cDNA TSS information 3'->5' (-) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS peak | A | 2 | + | 22687611 | -51 |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | A | clone | + | 22687508 | -154 |
TSS clone | G | clone | + | 22687570 | -92 |
TSS clone | T | clone | + | 22687571 | -91 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | ATAAGCCC | + | 22687372 | 22687379 | -290 | -283 | |||
AtREG462 | ATAAGCCC | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | AAGCGCGT | + | 22687488 | 22687495 | -174 | -167 | |||
AtREG492 | AAGCGCGT | PPDB Motif | ACGCGC  | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |