Summary of Gene (AT4G27652)
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Overview |
Genome position
from initiation codon TSS from cDNA TSS information AT4G27652 5'->3' (+) Promoter sequence AT4G27650.1
TSS from cDNA TSS information 3'->5' (-) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS peak | A | 8 | + | 13809833 | -112 |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | CATATATAAAGA | + | 13809799 | 13809810 | -146 | -135 |
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | TGTCGTTTT | + | 13809558 | 13809566 | -387 | -379 | |||
AtREG569 | TGTCGTTT | PPDB Motif |   | PLACE Motif |   | ||||
AtREG520 | GTCGTTTT | PPDB Motif |   | PLACE Motif |   | ||||
REG | ACGCGGTT | + | 13809696 | 13809703 | -249 | -242 | |||
AtREG441 | ACGCGGTT | Drought | PPDB Motif |   | PLACE Motif |   | |||
REG | CGTGTCAC | + | 13809768 | 13809775 | -177 | -170 | |||
AtREG498 | CGTGTCAC | ABA | PPDB Motif |   | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |