Summary of Gene (AT4G34760)
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Overview |
Genome position
from initiation codon TSS from cDNA TSS information AT4G34760 5'->3' (-) Promoter sequence AT4G34750.1
TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | T | clone | - | 16582908 | -114 |
TSS clone peak | T | clone | - | 16582879 | -85 |
TSS clone | C | clone | - | 16582875 | -81 |
TSS clone | A | clone | - | 16582857 | -63 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | TCTCCTTC | - | 16582864 | 16582871 | -70 | -77 |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | GGCCTTTAA | - | 16583028 | 16583036 | -234 | -242 | |||
AtREG467 | GGCCTTTA | PPDB Motif |   | PLACE Motif |   | ||||
AtREG639 | GCCTTTAA | PPDB Motif | AAACG(C/G)  | PLACE Motif |   | ||||
REG | GCCCTTAT | - | 16583204 | 16583211 | -410 | -417 | |||
AtREG616 | GCCCTTAT | PPDB Motif |   | PLACE Motif |   |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |