Summary of Gene (AT4G37432)
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Overview |
Genome position
TSS from cDNA TSS information AT4G37432 5'->3' (-) Promoter sequence AT4G37440.1
AT4G37440.2 TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
TSS clone | G | clone | + | 17601227 | AT4G37440.1, AT4G37440.2 |
TSS clone peak | A | clone | + | 17601233 | AT4G37440.1, AT4G37440.2 |
TSS clone | A | clone | + | 17601241 | AT4G37440.1, AT4G37440.2 |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | TCTCTCTCTCTCCC | + | 17601201 | 17601214 | AT4G37440.1, AT4G37440.2 | |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | GTGGCCCATTT | + | 17601006 | 17601016 | AT4G37440.1, AT4G37440.2 | ||||
AtREG445 | GTGGCCCA | PPDB Motif | GCCCA  | PLACE Motif | GCCAC, GGGCC, TGGGCY  | ||||
AtREG490 | TGGCCCAT | PPDB Motif | GCCCA  | PLACE Motif | GGGCC, TGGGCY  | ||||
AtREG361 | GGCCCATT | PPDB Motif | GCCCA  | PLACE Motif | GGGCC, TGGGCY  | ||||
AtREG386 | GCCCATTT | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | CCCATATA | + | 17601020 | 17601027 | AT4G37440.1, AT4G37440.2 | ||||
AtREG620 | CCCATATA | PPDB Motif | GCCCA  | PLACE Motif |   | ||||
REG | GGGTCAAA | + | 17601136 | 17601143 | AT4G37440.1, AT4G37440.2 | ||||
AtREG592 | GGGTCAAA | PPDB Motif |   | PLACE Motif | TTGAC, TTGACC  |