PlantPromoterDB promoter information of AT4G37432
Summary of Gene (AT4G37432)
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Overview
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Focused view (chromosome 4: 17602240-17601041)
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Genome position
TSS from cDNA TSS information AT4G37432 5'->3' (-) Promoter sequence AT4G37440.1
AT4G37440.2 TSS from cDNA TSS information 3'->5' (+) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Promoter Summary of AT4G37432
TSS information
| Type | Sequence | TPM score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Position from initiation codon | |
| Strand | Position | Position | |||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
Core promoter information
| Type | Sequence | Genome position | Position from initiation codon | |||
| Strand | Start | End | Start | End | ||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | None | None | None | |||
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
| Strand | Start | End | Start | End | |||||
| REG | None | None | None | ||||||
Other Reliable Promoter Summary
TSS information
| Type | Sequence | TPM score | Genome position | Gene model | |
| Strand | Position | ||||
| Not Available | Not Available | Not Available | Not Available | Not Available | |
TSS information from cDNA
| Type | Sequence | Score | Genome position | Gene model | |
| Strand | Position | ||||
| TSS clone | G | clone | + | 17601227 | AT4G37440.1, AT4G37440.2 |
| TSS clone peak | A | clone | + | 17601233 | AT4G37440.1, AT4G37440.2 |
| TSS clone | A | clone | + | 17601241 | AT4G37440.1, AT4G37440.2 |
Core promoter information
| Type | Sequence | Genome position | Gene model | |||
| Strand | Start | End | ||||
| initiator | Not Available | Not Available | Not Available | |||
| TATA Box | None | None | None | |||
| Y Patch | TCTCTCTCTCTCCC | + | 17601201 | 17601214 | AT4G37440.1, AT4G37440.2 | |
| GA | None | None | None | |||
| Inr | None | None | None | |||
REG information
| Type | Sequence | Annotation | Genome position | Gene model | |||||
| Strand | Start | End | |||||||
| REG | GGGTCAAA | + | 17601136 | 17601143 | AT4G37440.1, AT4G37440.2 | ||||
| AtREG592 | GGGTCAAA | PPDB Motif | PLACE Motif | TTGAC, TTGACC | |||||