Summary of Gene (AT5G59845)
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Overview |
Genome position
from initiation codon TSS from cDNA TSS information AT5G59845 5'->3' (+) Promoter sequence AT5G59840.1
TSS from cDNA TSS information 3'->5' (-) Promoter sequence TSS tag distribution(+)
TSS tag distribution(-)
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Type | Sequence | TPM score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
Not Available | Not Available | Not Available | Not Available | Not Available |
Type | Sequence | Score | Genome position | Position from initiation codon | |
Strand | Position | Position | |||
TSS clone | C | clone | + | 24111327 | -116 |
TSS clone peak | A | clone | + | 24111334 | -109 |
TSS clone | A | clone | + | 24111413 | -30 |
TSS clone | T | clone | + | 24111414 | -29 |
Type | Sequence | Genome position | Position from initiation codon | |||
Strand | Start | End | Start | End | ||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | None | None | None | |||
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Position from initiation codon | |||||
Strand | Start | End | Start | End | |||||
REG | None | None | None |
Type | Sequence | TPM score | Genome position | Gene model | |
Strand | Position | ||||
TSS peak | A | 2 | - | 24109232 | AT5G59840.1 |
Type | Sequence | Score | Genome position | Gene model | |
Strand | Position | ||||
TSS clone | G | clone | - | 24109251 | AT5G59840.1 |
Type | Sequence | Genome position | Gene model | |||
Strand | Start | End | ||||
initiator | Not Available | Not Available | Not Available | |||
TATA Box | None | None | None | |||
Y Patch | TCTCTTCTCTTCTCTTCTCCTCTCT | - | 24109192 | 24109216 | AT5G59840.1 | |
Y Patch | TTTCTTCTCT | - | 24109241 | 24109250 | AT5G59840.1 | |
Y Patch | CTCTCTCTC | - | 24109252 | 24109260 | AT5G59840.1 | |
GA | None | None | None | |||
Inr | None | None | None |
Type | Sequence | Annotation | Genome position | Gene model | |||||
Strand | Start | End | |||||||
REG | None | None | None |